I think we all have that kind of struggle, submissives and Dommes. For me it was, how do I reconcile being a feminist and my need for submission. Maybe its a women thing, we are inherently thought to feel guilty, either for being "weak" or for being "strong". Anyway, I realized there was nothing to reconcile. People's personalities are not linear creations, we are complex, illogical creators. Both of these traits are a part of me, and I am just me. As long as you stay true to yourself, and this is who you are, embrace it.
And btw, sex is more fun when its a little "bad",.